didericis
9e3e525a5b
Replace plane_depth_labelling with plane_depth_sequencing paper and script, remove unused lib modules
...
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com >
2026-04-24 21:10:06 -04:00
didericis
49f456e467
Move plot_to_data_uri to lib/colored_graphs and rename to plot_colored_graph_to_data_uri
...
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com >
2026-04-24 11:18:23 -04:00
didericis
07ad553568
Move Operation, op_to_transform_id, and operation_sequence_id to lib/operations
...
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com >
2026-04-21 21:24:00 -04:00
didericis
b343a61149
Move paper directories into papers/
...
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com >
2026-04-21 21:19:16 -04:00
didericis
00825eeb59
Add Python cache files to .gitignore
...
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com >
2026-04-21 21:18:24 -04:00
didericis
79afc929bc
Rename colored_pentagon_reduction to contractions and add example script
...
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com >
2026-04-21 21:17:42 -04:00
didericis
a094250cc8
Move canonize_colored_graph and save_colored_graph to lib/colored_graphs
...
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com >
2026-04-21 21:15:04 -04:00
didericis
6ebafba103
Rename Operation fields for clarity and grouping
...
source_graph/source_canon_id for before state, result_graph/result_coloring/result_canon_id for after state.
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com >
2026-04-21 21:09:41 -04:00
didericis
2cf51ecbb5
Move outer_face and get_embedding_from_pos to lib/planar_embedding
...
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com >
2026-04-21 21:04:17 -04:00
didericis
03f92494f1
Move tutte_embedding to lib, add bash completion, and fix NixOS setup
...
- Replace iterative tutte_embedding in lib with numpy direct-solve version from example.py
- Import tutte_embedding into example.py from lib instead of defining it locally
- Fix g._embedding -> g.get_embedding() in outer_face
- Add bash completion to run.sh alongside existing zsh completion
- Use nix-shell -p gcc for plantri build step on NixOS
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com >
2026-04-21 21:02:22 -04:00
didericis
52ba816a90
Add get_embedding_from_pos to derive combinatorial embedding from vertex positions
...
Replaces is_planar(set_embedding=True) calls in pluck and squish so the embedding
stays consistent with inherited positions across reduction steps.
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com >
2026-04-21 12:42:10 -04:00
didericis
92db9a5513
Rename Step/Op to ReduceOperation and steps/step to op_sequence/op
...
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com >
2026-04-21 12:27:59 -04:00
didericis
357cd74bed
Extract save_operation_sequence function from main script body
...
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com >
2026-04-21 12:13:19 -04:00
didericis
737db34109
Add outer_face and tutte_embedding for improved graph visualization
...
Adds outer face detection via face traversal and signed area, Tutte embedding
for clean planar layouts, and moves g/g_prime/coloring_prime into base Operation
type. Pluck and squish now carry positions and recompute embeddings via is_planar.
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com >
2026-04-21 03:05:18 -04:00
didericis
9e4d17bd50
Remove unused step param from reduce function
...
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com >
2026-04-21 01:47:08 -04:00
didericis
a4d51a6cfc
Refactor canonize_colored_graph to return new objects instead of mutating inputs
...
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com >
2026-04-21 01:43:52 -04:00
didericis
54b33a7003
Add operation tracking, graph saving, and markdown output for pentagon reduction
...
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com >
2026-04-21 01:36:22 -04:00
didericis
156f76c395
Move data output to root data/ symlink and gitignore generated files
...
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com >
2026-04-20 18:43:26 -04:00
didericis
5a4022c49c
chore: SAVEPOINT
2026-04-20 17:00:04 -04:00
didericis
6d977f5e35
chore: SAVEPOINT
2026-04-20 16:32:27 -04:00
didericis
4728c0b62a
chore: SAVEPOINT
2026-04-17 21:46:57 -04:00
didericis
a33020ab67
Add kempe proof fixed
2026-04-17 01:15:02 -04:00
didericis
2478ce5bae
Update setup command
2026-04-17 00:54:42 -04:00
didericis
fc277760af
Add sage code
2026-04-15 20:23:44 -04:00
didericis
c2298339ce
Reorganize papers
2026-04-15 19:35:05 -04:00
didericis
c233616b9a
Add run.sh script for creating new papers
2026-04-15 19:34:22 -04:00
didericis
76b8619bd3
chore: SAVEPOINT
2026-04-15 19:15:03 -04:00
didericis
ada26b6801
chore: SAVEPOINT
2026-04-13 11:01:31 -04:00
didericis
3098347da2
Initial commit
2026-04-12 22:23:55 -04:00
didericis